Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953006.1_cds_XP_016492376.1_82594
CDS Infomation

[gene=LOC107811897] [db_xref=GeneID:107811897] [protein=mitochondrial Rho GTPase 1-like] [protein_id=XP_016492376.1] [location=join(20958..21163,21264..21396,21950..22099,22182..22358,22474..22725,23140..23208,23945..24000,24639..24720,25206..25417,25624..25693,25985..26097,26856..27006,27156..27342,27503..27576)] [gbkey=CDS]
Sequence

ATGCTCGGCGGTTCAATTTCCGGCGGCCGTACTAACGTCCGCGTTGTCGTCGTCGGCGAC
CGCGCCACCGGCAAATCAAGCCTCATTACCGCTGCCGCCACTGAAACTTTTCCGGAGGAA
GTTCCGCCGGTGCTTCCTCCGACTCGACTTCCCGCCGATCTCTATCCTGATAATGTTCCT
GTTACGATCATTGACACTTCCTCGAGTTTGGAGAGCAGAGGTAAGGTTGCTGAAGAATTG
AAGCGAGCTGATGCTGTCGTCCTCACATATGCTTGCGATCAGCCTTCTACTCTCAATCGC
TTGACTACTTTCTGGCTTTACGAGTTTCGTCGCTTAGAGATCAAGGTGCCGGTAATTGTT
GTTGGCTGTAAGCTAGATAAGCGAGATGAGGAGCATCATATGAATCTAGAGCAAGTGATG
GCTCCAATCATGCAACAGTTCCGCGAGATTGAGACTTGCATAGAATGTTCTGCGGCAAAC
CTAGTTCAGGTACCCGAAGTGTTCTATTATGCTCAGAAAGCTGTACTTCATCCAACAGCT
CCACTTTTTGACCATGAAACTCAGGCTCTTAAACCCCGTTGTGTTAGAGCATTGAAACGG
ATATTTATCCTTTGTGATCATGACATGGATGATACTCTCAATGATGAAGAGCTTAATGAA
TTTCAGATTAAGTGCTTCAGTGCTCCCCTGCAGCCTGCTGAAATAGTGGGTGTCAAGAGA
GTAGTACAGGAGAAGCTACCTCAAGGTGTAAATGACATGGGGCTCACATTGACAGGCTTT
CTTTTTCTTCATGCACTTTTTATAGAGAAGGGTCGACTCGAGACCACTTGGACCGTGTTA
AGAAAATTTGGGTACAATGATGAAATTAAGCTGAAGGATGATTACCTTTCAATACCTTTC
AAAAAAGCTCCTGATCAGAATCTGGAGTTGACCAGCGAAGCAGTGGAGTTCTTGAAAGGG
GTCTTCAGCACATTTGACACTGATAAAGATGGAGTCCTTAGAAATTCTGAACTTGATGAT
CTATTTTCAACTGCACCAGAAAGTCCCTGGGGTGAAACTCCCTACAAGGATGCTGTGGAA
AGAACTCCATTAGGGGGCTTGTCTCTTTCTGCTTTCCTGTCTGAGTGGGCTCTTATGACG
TTGCTGGAACCAGCTCAAAGTTTGGCCAACTTGATATACATTGGGTATAACTGTGGTGCT
GCATCAGCACTCCGTCCTACCAGGAGAAGATCAGTCGATCGAAAGAAACAACAGACAGAT
CGAAATGTTTACCAGTGCTTTGTTTTTGGTCCTAAAGGATCCGGCAAATCGGCCTTGCTG
AAGTCATTATTGGGAAGGCCTTTCTCAGAAAATTATGCAGCGACAACTGACGAGCACTAT
GCTGTTAGTGTTGTTGACCGTCTTGGGGGAACTAAGAGAACTCTTGTACTTAGGGAGATT
CCAGAAGACGAAGTTAAGATGCTTCTATCTAATAAGGAATCTTTGGCGTCTTGTGATGTA
GCAGTGTTTGTATATGACAGCTCGGATGAATATTCTTTAAAAAGAGCATCGGAATTGCTA
ATGACTGTGGCAAGGCGAGGGGAAATTAGTGGTTTCATGATGCCTTGTCTATTTGTTGCT
GCAAAGGACGATCTTGATTCATATCCAATGGCAATAAAGGATTCAGCAAAGATATGTCAG
AGTTTTGGAATAGATGCACCTATTCACATAAGTGTAAAGGAGAGAGATCTGAATAGTGTG
TTCAATAGAATTGTCGCTGCTGCAGAGCACCCTCATTTAAGTGTTCCCGAAACTGAAGTT
GGACGTAGCCAGAAGCGATATCGTCACCTTGTTAATCGCTCTCTCATGTTTACTTCAGTT
GTGGCTGCTGTTGCCGTAGTTGGACTGGCAGCATATCGATCTTATGCTGCACGGAAGAAT
ACCTCAAGCTAG

Peptide Sequence

PEP ID

XP_016492376.1
PEP Infomation

PREDICTED: mitochondrial Rho GTPase 1-like [Nicotiana tabacum]
Sequence

MLGGSISGGRTNVRVVVVGDRATGKSSLITAAATETFPEEVPPVLPPTRLPADLYPDNVP
VTIIDTSSSLESRGKVAEELKRADAVVLTYACDQPSTLNRLTTFWLYEFRRLEIKVPVIV
VGCKLDKRDEEHHMNLEQVMAPIMQQFREIETCIECSAANLVQVPEVFYYAQKAVLHPTA
PLFDHETQALKPRCVRALKRIFILCDHDMDDTLNDEELNEFQIKCFSAPLQPAEIVGVKR
VVQEKLPQGVNDMGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNDEIKLKDDYLSIPF
KKAPDQNLELTSEAVEFLKGVFSTFDTDKDGVLRNSELDDLFSTAPESPWGETPYKDAVE
RTPLGGLSLSAFLSEWALMTLLEPAQSLANLIYIGYNCGAASALRPTRRRSVDRKKQQTD
RNVYQCFVFGPKGSGKSALLKSLLGRPFSENYAATTDEHYAVSVVDRLGGTKRTLVLREI
PEDEVKMLLSNKESLASCDVAVFVYDSSDEYSLKRASELLMTVARRGEISGFMMPCLFVA
AKDDLDSYPMAIKDSAKICQSFGIDAPIHISVKERDLNSVFNRIVAAAEHPHLSVPETEV
GRSQKRYRHLVNRSLMFTSVVAAVAVVGLAAYRSYAARKNTSS

Transcript Sequence

Gene sequence data has not been registered.